CDIGMP_MCA_0002
c-di-GMP Riboswitch, V. Cholerae
General
Construct
- RMDB ID
CDIGMP_MCA_0002- Name
- c-di-GMP Riboswitch, V. Cholerae
- Sequence (171 nt)
- XGGAAAAAUGUCACGCACAGGGCAAACCAUUCGAAAGAGUGGGACGCAAAGCCUCCGGCCUAAACCAGAAGACAUGGUAGGUAGCGGGGUUACCGAUGGCAAAAUGCAUACAAACCGUUAAGGAGUACUUAACAAAGAAACAACAACAACAACXCUGUAGGCACCAUCAAU
- Structure
- ...........................................................................................................................................................................
- Offset
- 0
- # of constructs
- 155
- # of data points
- 26334
- Last modified
- 12/17/17
- Version
- 1
- Owner
- Clarence Cheng
Comments
Output of MAPseeker v1.2 Raw data collected on 20131122 by W. Kladwang
Annotation
- processing: overmodificationCorrectionExact, ligationBiasCorrection:0.500
- offset: 1
- temperature: 24C
- chemical: MgCl2:10mM, HEPES:50mM(pH8.0), c-di-GMP:10uM
- MAPseq: tag:MOHCA, tag:RTU102-104, tag:Ascorbate
Citation
Cheng CY, Chou FC, Kladwang W, Tian S, Cordero P, Das R Consistent global structures of complex RNA states through multidimensional chemical mapping. eLife (2015) . doi:10.7554/eLife.07600 . PMID:26035425