GLYCFN_KNK_0009
Glycine Riboswitch, F. nucleatum
General
Construct
- RMDB ID
GLYCFN_KNK_0009- Name
- Glycine Riboswitch, F. nucleatum
- Sequence (245 nt)
- XGGAAGCCCGAGUAGGGCAAAUCGGAUGAAGAUAUGAGGAGAGAUUUCAUUUUAAUGAAACACCGAAGAAGUAAAUCUUUCAGGUAAAAAGGACUCAUAUUGGACGAACCUCUGGAGAGCUUAUCUAAGAGAUAACACCGAAGGAGCAAAGCUAAUUUUAGCCUAAACUCUCAGGUAAAAGGACGGAGAAAGCGCGAGUAGCGCAACAAAGAAACAACAACAACAACXCUGUAGGCACCAUCAAU
- Structure
- .....................................................................................................................................................................................................................................................
- Offset
- -30
- # of constructs
- 229
- # of data points
- 55860
- Last modified
- 12/11/17
- Version
- 1
- Owner
- Clarence Cheng
Comments
Output of MAPseeker v1.2 Raw data were collected on 20141217 by W. Kladwang Raw data are rebalanced from AMPure XP and DynaBead purifications
Annotation
- processing: overmodificationCorrectionExact, ligationBiasCorrection:0.500
- offset: -29
- temperature: 24C
- chemical: glycine:10mM, MgCl2:0mM, HEPES:50mM(pH8.0)
- MAPseq: tag:MOHCA, tag:RTU102-104, tag:Ascorbate
Citation
Cheng CY, Chou FC, Kladwang W, Tian S, Cordero P, Das R Consistent global structures of complex RNA states through multidimensional chemical mapping. eLife (2015) . doi:10.7554/eLife.07600 . PMID:26035425