RNAPZ6_MCA_0000

RNA Puzzle 6

RNA_Puzzles
Reactivity heatmap for RNAPZ6_MCA_0000
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Construct

RMDB ID
RNAPZ6_MCA_0000
Name
RNA Puzzle 6
Sequence (244 nt)
XGGAACAGCCCGAGUAGGGCCGGCAGGUGCUCCCGACCCUGCGGUCGGGAGUUAAAAGGGAAGCCGGUGCAAGUCCGGCACGGUCCCGCCACUGUGACGGGGAGUCGCCCCUCGGGAUGUGCCACUGGCCCGAAGGCCGGGAAGGCGGAGGGGCGGCGAGGAUCCGGAGUCAGGAAACCUGCCUGCCGGCGCGAGUAGCGCAAACGAAAGAAACAACAACAACAACXCUGUAGGCACCAUCAAU
Structure
....................................................................................................................................................................................................................................................
Offset
-18
# of constructs
227
# of data points
51076
Last modified
12/11/17
Version
2
Owner
Clarence Cheng

Comments

Output of MAPseeker v1.2
Applied COHCOA analysis

Annotation

  • processing: overmodificationCorrectionExact, ligationBiasCorrection:0.500
  • offset: -17
  • temperature: 24C
  • chemical: MgCl2:10mM, HEPES:50mM(pH8.0), adenosylcobalamin:70uM
  • MAPseq: tag:MOHCA, tag:RTU049-051, tag:Ascorbate

Citation

Cheng CY, Chou FC, Kladwang W, Tian S, Cordero P, Das R Consistent global structures of complex RNA states through multidimensional chemical mapping. eLife (2015) . doi:10.7554/eLife.07600 . PMID:26035425

Notes

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