TRP4P6_MCA_0004
P4-P6 Ribozyme Domain, T. thermophila
General
Construct
- RMDB ID
TRP4P6_MCA_0004- Name
- P4-P6 Ribozyme Domain, T. thermophila
- Sequence (221 nt)
- XGGCCAAAACAACGGAAUUGCGGGAAAGGGGUCAACAGCCGUUCAGUACCAAGUCUCAGGGGAAACUUUGAGAUGGCCUUGCAAAGGGUAUGGUAAUAAGCUGACGGACAUGGUCCUAACCACGCAGCCAAGUCCUAAGUCAACAGAUCUUCUGUUGAUAUGGAUGCAGUUCAAAACCAAACCAAAGAAACAACAACAACAACXCUGUAGGCACCAUCAAU
- Structure
- .............................................................................................................................................................................................................................
- Offset
- 88
- # of constructs
- 205
- # of data points
- 45084
- Last modified
- 12/11/17
- Version
- 2
- Owner
- Clarence Cheng
Comments
Output of MAPseeker v1.2 Raw data collected 20131005 by W. Kladwang From experiment to test effect of coupling radical source to A, C, G, or U; this data is for modified A only
Annotation
- processing: overmodificationCorrectionExact, ligationBiasCorrection:0.500
- offset: 89
- temperature: 24C
- chemical: MgCl2:10mM, HEPES:50mM(pH8.0)
- MAPseq: tag:MOHCA, tag:RTU101, tag:Ascorbate
Citation
Cheng CY, Chou FC, Kladwang W, Tian S, Cordero P, Das R Consistent global structures of complex RNA states through multidimensional chemical mapping. eLife (2015) . doi:10.7554/eLife.07600 . PMID:26035425