NEIL1_DMS_0004
NEIL1 dsRNA library
GeneralConstruct
- RMDB ID
NEIL1_DMS_0004- Name
- NEIL1 dsRNA library
- Sequence (79 nt)
- AGCCUGCCCUCUGAUCUCUGCCUGUUCCUCUGUCCCACAGGGGGCAAAGGCUCACGGGUCAGAGAGCGGGGAGGAGGAC
- Structure
- ..(((.(((((((.(((((((((((.(((.((((((....)))))).)))...))))).)))))).))))).)))))..
- Offset
- 0
- # of constructs
- 1
- # of data points
- 79
- Last modified
- 08/02/24
- Version
- 1
- Owner
- Xin Liu
Comments
RNA was heat to 95 C for 2 min and cool on ice for 1-2 min, then incubated at 37 C for 30 min at pH 7.0 (Sodium Cacodylate) with 10 mM MgCl2 to aid folding. Additional sequences at 5' and 3' end not shown.
Annotation
- modifier: DMS
- temperature: 37C
- chemical: Sodium Cacodylate:300mM (pH7.0), MgCl2:10mM
Citation
Liu X, Sun T, Shcherbina A, Li Q, Jarmoskaite I, Kappel K, Ramaswami G, Das R, Kundaje A, Li JB Learning cis-regulatory principles of ADAR-based RNA editing from CRISPR-mediated mutagenesis. Nature communications (2021) . doi:10.1038/s41467-021-22489-2 . PMID:33846332