P90LIB_DMS_0001

OpenKnotPilot_PK90

General
Reactivity heatmap for P90LIB_DMS_0001
Download .rdat

Construct

RMDB ID
P90LIB_DMS_0001
Name
OpenKnotPilot_PK90
Sequence (155 nt)
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Structure
...........................................................................................................................................................
Offset
0
# of constructs
2174
# of data points
236857
Last modified
02/22/24
Version
1
Owner
Jonathan Romano

Comments

from data: NovaSeq_2023-08-02_RH_VW_MutMap/PK90_MutMap_REPROCESS2
Mutational profiling
Library ordered from CustomArray

Annotation

  • modifier: DMS
  • processing: RNAFramework-v2.8.4, spread_deletions, backgroundSubtraction, normalization:value:0.0249, UBR-v1.2.2
  • reverse_transcriptase: Marathon
  • temperature: 24C
  • chemical: MgCl2:10mM, KOAc:150mM, bicine:150mM(pH8.5)

Citation

R. Huang, R. Das .

Notes

← Back to browse