SL5CV2_NOM_0002
SL5_SARS_CoV_2
General
Construct
- RMDB ID
SL5CV2_NOM_0002- Name
- SL5_SARS_CoV_2
- Sequence (206 nt)
- GGGAACGACUCGAGUAGAGUCGAAAAUCUACGGACACGAGUAACUCGUCUAUCUUCUGCAGGCUGCUUACGGUUUCGUCCGUGUUGCAGCCGAUCAUCAGCACAUCUAGGUUUCGUCCGGGUGUGACCGAAAGGUAAGAUGGAGAGCCUUGUCCCAAAAAUAAAACACUGGCGUUCGCGCCAGUGAAAAGAAACAACAACAACAAC
- Structure
- .....((((((.....)))))).........((...((((...(((.((.((((((((..((((((.(((((......)))))..))))))......)))(((((((.(((...))).)))))))(((....)))))))))).))).)))).))...........((((((((....)))))))).....................
- Offset
- 127
- # of constructs
- 125
- # of data points
- 20000
- Last modified
- 07/28/24
- Version
- 1
- Owner
- rui huang
Comments
Output of UBR from data: RH_NovaSeq_2023_06_06_SL5_M2seq Mutational Profiling Library ordered from Agilent, standard synthesis
Annotation
- modifier: nomod
- processing: RNAFramework-v2.8.3
- temperature: 24C
- chemical: HEPES:50mM(pH8.0), MgCl2:10mM
Citation
Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R Tertiary folds of the SL5 RNA from the 5' proximal region of SARS-CoV-2 and related coronaviruses. Proceedings of the National Academy of Sciences of the United States of America (2024) . doi:10.1073/pnas.2320493121 . PMID:38427602