SL5MER_DMS_0001
SL5_MERS_GCadded
General
Construct
- RMDB ID
SL5MER_DMS_0001- Name
- SL5_MERS_GCadded
- Sequence (206 nt)
- GGGAACGACUCGAGUAGAGUCGAAAAGGAGCGUCGUGUCUCUUGUACGUCUCGGUCACAAUACACGGUUUCGUCCGGUGCGUGGCAAUUCGGGGCACAUCAUGUCUUUCGUGGCUGGUGUGACCGCGCAAGGUGCGCGCGGUACGUAUCGAGCAGCGCUCCAAAACAUUGCUCUUCGGAGCAAUGAAAAGAAACAACAACAACAAC
- Structure
- .....((((((.....))))))....(((((((..((.(((..(((((((((((((((..(((.(((......)))))).)))))....)))).(((((((.(((......))))))))))(((((((.......))))))))))))).))))))))))))....((((((((....)))))))).....................
- Offset
- 178
- # of constructs
- 136
- # of data points
- 21760
- Last modified
- 07/28/24
- Version
- 1
- Owner
- rui huang
Comments
Output of UBR from data: RH_NovaSeq_2023_06_06_SL5_M2seq Mutational Profiling Library ordered from Agilent, standard synthesis
Annotation
- modifier: DMS
- processing: RNAFramework-v2.8.3
- temperature: 24C
- chemical: bicine:150mM(pH8.5), MgCl2:10mM
Citation
Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R Tertiary folds of the SL5 RNA from the 5' proximal region of SARS-CoV-2 and related coronaviruses. Proceedings of the National Academy of Sciences of the United States of America (2024) . doi:10.1073/pnas.2320493121 . PMID:38427602